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Niche overlap null models

Functions used for running niche overlap null models

• niche_null_model
  Niche overlap null model engine
• ra1
  RA1 Niche Overlap Randomization Algorithm
• ra2
  RA2 Niche Overlap Randomization Algorithm
• ra3
  RA3 Niche Overlap Randomization Algorithm
• ra4
  RA4 Niche Overlap Randomization Algorithm
• species_combo
  Number of species combinations
• checker
  Number of checkerboard species pairs
• c_score
  C-score
• c_score_var
  C-score variance
• c_score_skew
  C-score skew
• v_ratio
  Schluter's V-ratio

Other

• cooc_null_model
  Co-Occurrence Null model
• czekanowski
  Czekanowski niche overlap
• czekanowski_skew
  Czekanowski skew
• czekanowski_var
  Czekanowski variance
• dataMacWarb
  MacArthur Warbler data warbler data
• dataRodents
  Desert rodent data set
• dataWiFinches
  West Indian Finches data
• EcoSimR(EcoSimR-package)
  EcoSimR
• min_diff
  Minimum size difference
• min_ratio
  Minimum size ratio
• null_model_engine
  Run null model
• pianka
  Pianka niche overlap
• pianka_skew
  Pianka skew
• pianka_var
  Pianka variance
• plot.coocnullmod
  Co-Occurrence Model Plot function
• plot.nichenullmod
  Niche Null Model Plot function
• plot.sizenullmod
  plot a size null model
• ranMatGen
  Random Matrix Generator
• reproduce_model
  Reproduce a result
• sim1
  Sim1 Co-occurrence Randomization Algorithm
• sim10
  Sim10 Co-occurrence Randomization Algorithm
• sim2
  Sim2 Co-occurrence Randomization Algorithm
• sim3
  Sim3 Co-occurrence Randomization Algorithm
• sim4
  Sim4 Co-occurrence Randomization Algorithm
• sim5
  Sim5 Co-occurrence Randomization Algorithm
• sim6
  Sim6 Co-occurrence Randomization Algorithm
• sim7
  Sim7 Co-occurrence Randomization Algorithm
• sim8
  Sim8 Co-occurrence Randomization Algorithm
• sim9
  sim9.fast
• sim9_single
  sim9_single
• size_gamma
  SizeGamma Size Overlap Randomization Algorithm
• size_null_model
  Size Ratio
• size_source_pool
  SizeSourcePoolDraw Size Overlap Randomization Algorithm
• size_uniform
  SizeUniform Size Overlap Randomization Algorithm
• size_uniform_user
  SizeUser Size Overlap Randomization Algorithm
• summary.coocnullmod
  Generic function for calculating null model summary statistics
• summary.nichenullmod
  Generic function for calculating null model summary statistics
• summary.sizenullmod
  Generic function for calculating null model summary statistics
• var_diff
  Variance in size differences
• var_ratio
  Variance in size ratios
• vector_sample
  Vector Sample Function